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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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PAK1IP1
PAK1 interacting protein 1
Chromosome 6 · 6p24.2
NCBI Gene: 55003Ensembl: ENSG00000111845.6HGNC: HGNC:20882UniProt: A0A0S2Z5C3
71PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
ribosomal large subunit biogenesisprotein bindingregulation of signal transduction by p53 class mediatornucleolus
✦AI Summary

PAK1IP1 is a nucleolar protein that functions as a negative regulator of PAK1 kinase signaling. PAK1IP1 binds to the N-terminus of PAK1 and inhibits its activation by CDC42 1, thereby suppressing downstream PAK1/ERK1/2 signaling cascades. The protein plays a crucial role in ribosomal biogenesis and rRNA processing 2, and responds to ribosomal stress by regulating the p53-MDM2 feedback loop 2. PAK1IP1 inhibits MDM2-mediated p53 ubiquitination, leading to p53 accumulation and G1 cell-cycle arrest 2. Clinically, PAK1IP1 dysfunction is associated with craniofacial abnormalities. Mouse Pak1ip1 mutations cause severe orofacial clefting through loss of neural crest cells and impaired cell cycle progression 34, with human PAK1IP1 mapping to chromosome 6 translocation breakpoints in orofacial clefting cases 3. In hepatocellular carcinoma, PAK1IP1 is upregulated and promotes tumor progression; knockdown suppresses HCC proliferation and migration while inducing pyroptosis 5. PAK1IP1 also influences cardiovascular pathology, where TBK1-mediated PAK1IP1 inhibition promotes endothelial-to-mesenchymal transition and atherogenesis 1. These findings position PAK1IP1 as a multifunctional regulator with implications for developmental, oncologic, and cardiovascular diseases.

Sources cited
1
PAK1IP1 binds to PAK1, and TBK1 interaction with PAK1IP1 reduces PAK1IP1-PAK1 binding, increasing PAK1/ERK1/2 phosphorylation and endothelial-to-mesenchymal transition
PMID: 41685426
2
PAK1IP1 is a nucleolar protein induced by ribosomal stress that regulates p53-MDM2 feedback loop by binding MDM2 and inhibiting p53 ubiquitination and degradation
PMID: 21097889
3
Mouse Pak1ip1 mutations cause orofacial clefting and craniofacial defects; human PAK1IP1 maps to chromosome 6p24 translocation breakpoints associated with orofacial clefting
PMID: 23935987
4
Pak1ip1 loss-of-function causes cell cycle arrest and loss of neural crest cells, leading to craniofacial abnormalities and decreased protein biosynthesis
PMID: 32984348
5
PAK1IP1 is upregulated in hepatocellular carcinoma; knockdown suppresses HCC proliferation and migration while inducing pyroptosis through caspase and gasdermin pathways
PMID: 40302327
6
PAK1IP1 is identified as a hub gene linking type 2 diabetes mellitus and atrial fibrillation through epicardial adipose tissue, with roles in stress responses and immune regulation
PMID: 38703871
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MPHOSPH10Protein interaction99%KRR1Protein interaction96%PDCD11Protein interaction95%GTPBP4Protein interaction94%BYSLProtein interaction93%CEBPZProtein interaction93%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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PAK1IP1MPHOSPH10KRR1PDCD11GTPBP4BYSLCEBPZ
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q9NWT1
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.28LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.80 [0.52–1.28]
RankingsWhere PAK1IP1 stands among ~20K protein-coding genes
  • #6,658of 20,598
    Most Researched71
  • #13,447of 17,882
    Most Constrained (LOEUF)1.28
Genes detectedPAK1IP1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
A mutation in mouse Pak1ip1 causes orofacial clefting while human PAK1IP1 maps to 6p24 translocation breaking points associated with orofacial clefting.
PMID: 23935987
PLoS One · 2013
1.00
2
Endothelial TBK1 Deficiency Inhibits Endothelial-to-Mesenchymal Transition and Atherogenesis Through Suppressing PAK1/ERK1/2 Signaling.
PMID: 41685426
Circ Res · 2026
0.90
3
PAK1IP1, a ribosomal stress-induced nucleolar protein, regulates cell proliferation via the p53-MDM2 loop.
PMID: 21097889
Nucleic Acids Res · 2011
0.80
4
Functional pharmacogenomics and toxicity of PolyPurine Reverse Hoogsteen hairpins directed against survivin in human cells.
PMID: 29940174
Biochem Pharmacol · 2018
0.70
5
Knockdown of
PMID: 40302327
Front Biosci (Landmark Ed) · 2025
0.60