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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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PCBP3
poly(rC) binding protein 3
Chromosome 21 · 21q22.3
NCBI Gene: 54039Ensembl: ENSG00000183570.18HGNC: HGNC:8651UniProt: P57721
66PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
extracellular exosomenucleusRNA bindingcytosolmathematical abilityovarian neoplasmspondylolisthesisHodgkins lymphoma
✦AI Summary

PCBP3 (poly(rC) binding protein 3) is an RNA-binding protein that preferentially binds oligodeoxycytidine sequences and localizes to the nucleus, cytoplasm, and extracellular exosomes. It regulates mRNA metabolism and transcription, with demonstrated roles in post-transcriptional gene regulation 1. PCBP3 participates in alternative splicing regulation during epithelial-mesenchymal transition in breast cancer, affecting expression of cell adhesion genes including ITGA6, ADGRE5, and TNC 1. The protein is functionally distinct from PCBP2, which serves as an iron chaperone for ferroportin 1-mediated iron export; PCBP3 does not interact with ferroportin 1 2. PCBP3 plays a crucial role in pancreatic cancer ferroptosis through direct interaction with lncRNA A2M-AS1, promoting iron metabolism-dependent cell death via p38 activation and AKT-mTOR pathway inhibition 3. Clinically, PCBP3 expression levels correlate with pancreatic cancer prognosis and tumor stage, serving as a potential biomarker for favorable outcomes 4. Additionally, PCBP3 variants are associated with diffusion capacity for carbon monoxide (DlCO) in COPD patients 5, and PCBP3 displays notable genetic variation in human populations, with differential repeat composition across superpopulations 6.

Sources cited
1
PCBP3 regulates alternative splicing of cell adhesion genes during EMT in breast cancer
PMID: 38783078
2
PCBP3 levels correlate with pancreatic cancer tumor stage and prognosis
PMID: 30275197
3
PCBP3 does not bind ferroportin 1, unlike PCBP2
PMID: 27302059
4
PCBP3 interacts with lncRNA A2M-AS1 to promote ferroptosis via iron metabolism
PMID: 35920801
5
PCBP3 variants are associated with DlCO in COPD
PMID: 30694715
6
PCBP3 contains variable number tandem repeats with population-specific variation
PMID: 34244228
Disease Associationsⓘ20
mathematical abilityOpen Targets
0.27Weak
ovarian neoplasmOpen Targets
0.23Weak
spondylolisthesisOpen Targets
0.23Weak
Hodgkins lymphomaOpen Targets
0.21Weak
refractive errorOpen Targets
0.21Weak
vascular diseaseOpen Targets
0.20Weak
Graves diseaseOpen Targets
0.18Weak
Abnormality of refractionOpen Targets
0.12Weak
myopiaOpen Targets
0.11Weak
HypermetropiaOpen Targets
0.07Suggestive
Progressive visual lossOpen Targets
0.05Suggestive
Alzheimer diseaseOpen Targets
0.02Suggestive
brain cancerOpen Targets
0.02Suggestive
nervous system cancerOpen Targets
0.02Suggestive
lung carcinomaOpen Targets
0.02Suggestive
SepsisOpen Targets
0.01Suggestive
Dravet syndromeOpen Targets
0.01Suggestive
pulmonary fibrosisOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.01Suggestive
osteopathia striata with cranial sclerosisOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
PABPC3Shared pathway100%PNRC1Shared pathway100%ATXN2LShared pathway50%METTL8Shared pathway33%PNRC2Shared pathway33%ALYREFShared pathway20%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
63%
Ovary
15%
Heart
8%
Lung
7%
Liver
4%
Gene Interaction Network
Click a node to explore
PCBP3PABPC3PNRC1ATXN2LMETTL8PNRC2ALYREF
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt P57721
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.70LoF Tolerant
pLIⓘ
0.03Tolerant
Observed/Expected LoF0.47 [0.32–0.70]
RankingsWhere PCBP3 stands among ~20K protein-coding genes
  • #7,101of 20,598
    Most Researched66
  • #5,361of 17,882
    Most Constrained (LOEUF)0.70
Genes detectedPCBP3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Genome-wide identification and analysis of epithelial-mesenchymal transition-related RNA-binding proteins and alternative splicing in a human breast cancer cell line.
PMID: 38783078
Sci Rep · 2024
1.00
2
Proteomic Identification of FLT3 and PCBP3 as Potential Prognostic Biomarkers for Pancreatic Cancer.
PMID: 30275197
Anticancer Res · 2018
0.90
3
Exploration of RNA-binding proteins identified RPS27 as a potential regulator associated with Kaposi's sarcoma development.
PMID: 40016701
BMC Cancer · 2025
0.80
4
Genome-Wide Association Analysis of Single-Breath Dl
PMID: 30694715
Am J Respir Cell Mol Biol · 2019
0.70
5
Early DNA methylation changes in children developing beta cell autoimmunity at a young age.
PMID: 35142878
Diabetologia · 2022
0.60