HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
25 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
RBM25
RNA binding motif protein 25
Chromosome 14 · 14q24.2
NCBI Gene: 58517Ensembl: ENSG00000119707.15HGNC: HGNC:23244UniProt: P49756
177PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedHub Gene
RESEARCH IMPACT
Trending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA bindingnuclear speckmRNA bindingprotein bindingintelligenceobesityplacental retentionhepatocellular carcinoma
✦AI Summary

RBM25 is an RNA-binding protein that functions as a key regulator of alternative pre-mRNA splicing with diverse roles in cellular processes and disease. The protein contains a PWI domain that forms a four-helix bundle with an adjacent basic region, creating an enlarged nucleic acid-binding platform 1. RBM25 controls alternative splicing through multiple mechanisms, including binding to G-quadruplex structures in pre-mRNA. Most notably, it regulates BCL-x splicing by binding to an RNA G-quadruplex near the alternative 5' splice site, promoting production of the pro-apoptotic Bcl-xS isoform over the anti-apoptotic Bcl-xL isoform 2. Beyond apoptosis regulation, RBM25 demonstrates broad splicing regulatory functions, controlling alternative splicing of genes like MNK2 in colon cancer, where it promotes oncogenic MNK2b isoform production 3. The protein also regulates ACLY splicing, influencing metabolic rewiring and inflammation in macrophages 4. Clinically, RBM25 shows disease relevance across multiple conditions: it's overexpressed in colon cancer correlating with poor prognosis 3, elevated in preeclampsia where it disrupts trophoblast migration 5, and decreased in rheumatoid arthritis contributing to hyperinflammation 4. The protein's ability to control splicing makes it a promising therapeutic target, with G-quadruplex ligands showing potential to modulate its activity 2.

Sources cited
1
RBM25 contains a PWI domain with four-helix bundle structure and flanking basic region forming nucleic acid-binding platform
PMID: 23190262
2
RBM25 binds to RNA G-quadruplex structures in BCL-x pre-mRNA to regulate alternative splicing between pro-apoptotic and anti-apoptotic isoforms
PMID: 37811881
3
RBM25 is overexpressed in colon cancer, correlates with poor prognosis, and regulates MNK2 alternative splicing
PMID: 39110401
4
RBM25 regulates ACLY splicing affecting metabolic rewiring and inflammation, with decreased expression in rheumatoid arthritis
PMID: 39251781
5
RBM25 expression is elevated in preeclampsia and affects trophoblast cell migration and invasion through EMT regulation
PMID: 37728157
Disease Associationsⓘ20
intelligenceOpen Targets
0.30Weak
obesityOpen Targets
0.27Weak
placental retentionOpen Targets
0.19Weak
hepatocellular carcinomaOpen Targets
0.08Suggestive
acute myeloid leukemiaOpen Targets
0.08Suggestive
early-onset non-syndromic cataractOpen Targets
0.06Suggestive
Isolated anophthalmia - microphthalmiaOpen Targets
0.06Suggestive
Cataract-microcornea syndromeOpen Targets
0.06Suggestive
Total congenital cataractOpen Targets
0.05Suggestive
Cataract with Y-shaped suture opacitiesOpen Targets
0.05Suggestive
Posterior polar cataractOpen Targets
0.05Suggestive
microphthalmia, isolated, with colobomaOpen Targets
0.05Suggestive
Familial ocular anterior segment mesenchymal dysgenesisOpen Targets
0.05Suggestive
Partial congenital cataractOpen Targets
0.05Suggestive
early-onset zonular cataractOpen Targets
0.04Suggestive
Peters anomalyOpen Targets
0.04Suggestive
neoplasmOpen Targets
0.04Suggestive
aniridia - intellectual disability syndromeOpen Targets
0.04Suggestive
Aniridia-intellectual disability syndromeOpen Targets
0.04Suggestive
Anterior polar cataractOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SF3B3Protein interaction100%SNRPGProtein interaction100%SNRPA1Protein interaction100%SF3B1Protein interaction100%SNRPD1Protein interaction100%PRRC2CProtein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
33%
Lung
28%
Liver
24%
Brain
21%
Heart
18%
Gene Interaction Network
Click a node to explore
RBM25SF3B3SNRPGSNRPA1SF3B1SNRPD1PRRC2C
PROTEIN STRUCTURE
Preparing viewer…
PDB3V53 · 2.90 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.20Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.12 [0.08–0.20]
RankingsWhere RBM25 stands among ~20K protein-coding genes
  • #2,468of 20,598
    Most Researched177 · top quartile
  • #439of 17,882
    Most Constrained (LOEUF)0.20 · top 5%
Genes detectedRBM25
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-Based Regulation of Transcription.
PMID: 31251911
Cell · 2019
1.00
2
RBM25 is required to restrain inflammation via ACLY RNA splicing-dependent metabolism rewiring.
PMID: 39251781
Cell Mol Immunol · 2024
0.90
3
A single-cell atlas of RNA alternative splicing in the glioma-immune ecosystem.
PMID: 41387900
Genome Biol · 2025
0.80
4
Alternative splicing of BCL-x is controlled by RBM25 binding to a G-quadruplex in BCL-x pre-mRNA.
PMID: 37811881
Nucleic Acids Res · 2023
0.80
5
Metformin attenuates multiple myeloma cell proliferation and encourages apoptosis by suppressing METTL3-mediated m6A methylation of THRAP3, RBM25, and USP4.
PMID: 36762777
Cell Cycle · 2023
0.70