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50 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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S100A9
S100 calcium binding protein A9
Chromosome 1 · 1q21.3
NCBI Gene: 6280Ensembl: ENSG00000163220.12HGNC: HGNC:10499UniProt: P06702
704PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
RESEARCH IMPACT
Highly StudiedTrending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingpeptidyl-cysteine S-trans-nitrosylationpositive regulation of intrinsic apoptotic signaling pathwayplasma membraneinborn error of immunitySepsisneoplasmhepatocellular carcinoma
✦AI Summary

S100A9 is a calcium- and zinc-binding protein that plays critical roles in inflammatory processes and immune responses, particularly in neutrophil function and tissue repair. The protein undergoes post-translational modifications including lactylation at lysine 26, which promotes neutrophil trafficking and cardiac inflammation in myocardial ischemia/reperfusion injury 1. S100A9 functions as a damage-associated molecular pattern (DAMP) molecule, activating immune responses through TLR4 and RAGE signaling pathways 2. In sepsis, S100A9 contributes to immunosuppression through HLA-DR^low S100A^high monocytes that inhibit CD4+ T cell responses 3. The protein exhibits tissue-specific functions: in myocardial infarction, S100A9 is essential for both inflammatory and reparatory phases, with extended blockade impairing cardiac recovery 4; in cancer, intracellular S100A9 drives brain metastasis through ALDH1A1-retinoic acid signaling 5; and in ischemic stroke, S100A9 deletion in microglia/macrophages promotes neuroprotection via STAT6/PPARγ signaling 6. During neonatal development, S100A9 regulates gut microbiota composition and immune system maturation, with deficiency leading to increased susceptibility to sepsis and altered metabolic outcomes 7. In pancreatitis, S100A9 mediates NLRP3 inflammasome activation through VNN1-dependent ROS release 8.

Sources cited
1
S100A9 undergoes lactylation at lysine 26, promoting neutrophil trafficking and cardiac inflammation in myocardial ischemia/reperfusion
PMID: 41066195
2
S100A9 functions as a DAMP molecule activating TLR4 and RAGE signaling pathways in melanoma immunosuppression
PMID: 39266214
3
S100A9 contributes to sepsis-induced immunosuppression through HLA-DR^low S100A^high monocytes
PMID: 37337301
4
S100A9 is essential for both inflammatory and reparatory phases in myocardial infarction, with extended blockade impairing recovery
PMID: 32434457
5
Intracellular S100A9 drives brain metastasis through ALDH1A1-retinoic acid signaling in EGFR-mutant lung cancer
PMID: 35078784
6
S100A9 deletion in microglia/macrophages promotes neuroprotection via STAT6/PPARγ pathway in ischemic stroke
PMID: 39107960
7
S100A9 regulates neonatal gut microbiota development and immune system maturation
PMID: 32805279
8
S100A9 mediates NLRP3 inflammasome activation through VNN1-dependent ROS release in pancreatitis
PMID: 33754072
Disease Associationsⓘ20
inborn error of immunityOpen Targets
0.37Weak
SepsisOpen Targets
0.12Weak
neoplasmOpen Targets
0.12Weak
hepatocellular carcinomaOpen Targets
0.11Weak
cancerOpen Targets
0.11Weak
colorectal carcinomaOpen Targets
0.11Weak
response to antihypertensive drugOpen Targets
0.11Weak
idiopathic pulmonary fibrosisOpen Targets
0.11Weak
Alzheimer diseaseOpen Targets
0.11Weak
nasopharyngeal carcinomaOpen Targets
0.11Weak
colitisOpen Targets
0.10Weak
breast cancerOpen Targets
0.10Weak
glioblastoma multiformeOpen Targets
0.10Weak
squamous cell carcinomaOpen Targets
0.10Suggestive
cervical cancerOpen Targets
0.10Suggestive
subarachnoid hemorrhageOpen Targets
0.09Suggestive
acute myeloid leukemiaOpen Targets
0.09Suggestive
psoriasisOpen Targets
0.09Suggestive
prostate cancerOpen Targets
0.09Suggestive
cholangiocarcinomaOpen Targets
0.09Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TLR4Protein interaction100%CD36Protein interaction100%LY96Protein interaction100%S100A7Protein interaction86%CD14Protein interaction86%CYBBProtein interaction86%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
18%
Liver
1%
Brain
0%
Heart
0%
Ovary
0%
Gene Interaction Network
Click a node to explore
S100A9TLR4CD36LY96S100A7CD14CYBB
PROTEIN STRUCTURE
Preparing viewer…
PDB4GGF · 1.60 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.47LoF Tolerant
pLIⓘ
0.22Tolerant
Observed/Expected LoF0.49 [0.20–1.47]
RankingsWhere S100A9 stands among ~20K protein-coding genes
  • #306of 20,598
    Most Researched704 · top 5%
  • #14,984of 17,882
    Most Constrained (LOEUF)1.47
Genes detectedS100A9
Sources retrieved50 papers
Response time—
📄 Sources
50▼
1
S100a9 lactylation triggers neutrophil trafficking and cardiac inflammation in myocardial ischemia/reperfusion injury.
PMID: 41066195
J Clin Invest · 2025
1.00
2
Single-cell transcriptome profiling of sepsis identifies HLA-DR
PMID: 37337301
Mil Med Res · 2023
0.90
3
S100A9 and HMGB1 orchestrate MDSC-mediated immunosuppression in melanoma through TLR4 signaling.
PMID: 39266214
J Immunother Cancer · 2024
0.80
4
Identifying hub genes of calcific aortic valve disease and revealing the immune infiltration landscape based on multiple WGCNA and single-cell sequence analysis.
PMID: 36405745
Front Immunol · 2022
0.80
5
Deficiency of S100A8/A9 attenuates pulmonary microvascular leakage in septic mice.
PMID: 37978525
Respir Res · 2023
0.78