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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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SPACA6
sperm acrosome associated 6
Chromosome 19 · 19q13.41
NCBI Gene: 147650Ensembl: ENSG00000182310.16HGNC: HGNC:27113UniProt: A0AA34QVJ1
12PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingprotein-macromolecule adaptor activitysperm-egg recognitionplasma membraneazoospermiaMale infertility with spermatogenesis disorder due to single gene mutationRare genetic female infertilityFemale infertility due to fertilization defect
✦AI Summary

SPACA6 (sperm acrosome associated 6) is an essential sperm surface protein required for mammalian fertilization, specifically functioning in sperm-egg membrane fusion rather than initial adhesion 1. The protein localizes to the sperm equatorial segment following acrosomal reaction and remains present during fertilization 1. Structurally, SPACA6 contains a two-domain ectodomain with a four-helix bundle and immunoglobulin-like β-sandwich connected by a flexible linker, making it a founding member of the IST superfamily of fertilization-associated proteins alongside IZUMO1 2. SPACA6 functions as part of a conserved trimeric sperm complex with IZUMO1 and TMEM81 that mediates sperm-egg interaction 3. During fertilization, SPACA6 participates in a phagocytosis-like process termed SEAL (sperm engulfment activated by IZUMO1-JUNO linkage), where it helps facilitate the oocyte's engulfment of sperm to initiate membrane fusion 4. Male mice lacking SPACA6 are infertile, with sperm unable to fuse with oocytes despite accumulating in the perivitelline space 1. Anti-SPACA6 antibodies can inhibit human fertilization, indicating its clinical relevance for male fertility 1.

Sources cited
1
SPACA6 is essential for sperm-egg fusion, localizes to equatorial segment, and is required for human fertilization
PMID: 32210282
2
SPACA6 structure contains two-domain ectodomain and belongs to IST superfamily with IZUMO1
PMID: 36115925
3
SPACA6 forms conserved trimeric sperm complex with IZUMO1 and TMEM81
PMID: 39423812
4
SPACA6 participates in SEAL process during sperm engulfment by oocyte
PMID: 40138310
⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
azoospermiaOpen Targets
0.09Suggestive
Male infertility with spermatogenesis disorder due to single gene mutationOpen Targets
0.09Suggestive
Rare genetic female infertilityOpen Targets
0.09Suggestive
Female infertility due to fertilization defectOpen Targets
0.08Suggestive
partial chromosome Y deletionOpen Targets
0.08Suggestive
breast cancerOpen Targets
0.08Suggestive
female infertility due to oocyte meiotic arrestOpen Targets
0.07Suggestive
colorectal cancerOpen Targets
0.07Suggestive
colorectal carcinomaOpen Targets
0.07Suggestive
oocyte maturation defect 14Open Targets
0.07Suggestive
oocyte maturation defect 5Open Targets
0.07Suggestive
spermatogenic failure 3Open Targets
0.07Suggestive
spermatogenic failure 55Open Targets
0.07Suggestive
spermatogenic failure 26Open Targets
0.07Suggestive
spermatogenic failure 31Open Targets
0.07Suggestive
spermatogenic failure 53Open Targets
0.07Suggestive
spermatogenic failure 87Open Targets
0.07Suggestive
spermatogenic failure 61Open Targets
0.07Suggestive
spermatogenic failure 62Open Targets
0.07Suggestive
spermatogenic failure 88Open Targets
0.07Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SNRPGProtein interaction100%LSM4Protein interaction100%SNRPD2Protein interaction100%SNRPFProtein interaction100%SNRPEProtein interaction100%DCST2Protein interaction84%
Tissue Expression6 tissues
Ovary
100%
Lung
30%
Heart
19%
Bone Marrow
12%
Liver
11%
Brain
11%
Gene Interaction Network
Click a node to explore
SPACA6SNRPGLSM4SNRPD2SNRPFSNRPEDCST2
PROTEIN STRUCTURE
Preparing viewer…
PDB7TA2 · 2.25 Å · X-ray
View on RCSB ↗
RankingsWhere SPACA6 stands among ~20K protein-coding genes
  • #16,577of 20,598
    Most Researched12
Genes detectedSPACA6
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
A conserved fertilization complex bridges sperm and egg in vertebrates.
PMID: 39423812
Cell · 2024
1.00
2
Deep learning insights into the architecture of the mammalian egg-sperm fusion synapse.
PMID: 38666763
Elife · 2024
0.90
3
Noncanonical phagocytosis-like SEAL establishes mammalian fertilization.
PMID: 40138310
Cell Rep · 2025
0.80
4
Sperm SPACA6 protein is required for mammalian Sperm-Egg Adhesion/Fusion.
PMID: 32210282
Sci Rep · 2020
0.70
5
Molecular mechanisms leading to gamete fusion.
PMID: 40058809
Fukushima J Med Sci · 2025
0.60