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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SRSF12
serine and arginine rich splicing factor 12
Chromosome 6 · 6q15
NCBI Gene: 135295Ensembl: ENSG00000154548.10HGNC: HGNC:21220UniProt: Q8WXF0
30PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA bindingmRNA 5'-splice site recognitionregulation of alternative mRNA splicing, via spliceosomeprotein bindingplacenta praeviaarthritishepatocellular carcinomapancreatic adenocarcinoma
✦AI Summary

SRSF12 is a serine/arginine-rich splicing factor that functions as a negative regulator of pre-mRNA splicing. Unlike most SR proteins that promote exon inclusion, SRSF12 antagonizes splice site recognition and promotes exon skipping 1. Mechanistically, SRSF12 localizes to nuclear speckles and interacts with core splicing components and regulatory factors 2. SRSF12 is notably primate-specific in expression, showing high levels in human testis, oocytes, and brain tissue, where it orchestrates tissue-specific gene expression programs including meiosis and testis-specific genes 2. Functionally, SRSF12 regulates alternative splicing of specific transcripts; for instance, it generates particular LAMA3 splice isoforms that suppress neurite outgrowth 3. In disease contexts, SRSF12 dysfunction has clinical significance: its downregulation in pancreatic cancer correlates with poor prognosis and enhanced tumor innervation, indicating it acts as a tumor suppressor 3. Additionally, SRSF12 is upregulated during pro-inflammatory macrophage polarization and is essential for proper immune gene expression 4. SRSF12 overexpression paradoxically induces cell death and mitotic arrest through both its RNA-recognition motif and intrinsically disordered C-terminal domain 2, suggesting cellular-context-dependent effects.

Sources cited
1
SRSF12 promotes exon skipping and antagonizes SR protein activity in CLK1 pre-mRNA splicing
PMID: 39251328
2
SRSF12 downregulation accelerates pancreatic tumorigenesis and enhances tumor innervation; acts as tumor suppressor
PMID: 39986371
3
SRSF12 is primate-specific, expressed in testis/brain, localizes to nuclear speckles, and induces meiosis/testis-specific genes; overexpression causes mitotic arrest
PMID: 40777280
4
SRSF12 is highly upregulated in pro-inflammatory macrophages and required for immune gene expression regulation
PMID: 37359548
⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
placenta praeviaOpen Targets
0.24Weak
arthritisOpen Targets
0.04Suggestive
hepatocellular carcinomaOpen Targets
0.04Suggestive
pancreatic adenocarcinomaOpen Targets
0.04Suggestive
acute myeloid leukemiaOpen Targets
0.03Suggestive
triple-negative breast cancerOpen Targets
0.03Suggestive
Benign Thyroid Gland NeoplasmOpen Targets
0.03Suggestive
neoplasmOpen Targets
0.03Suggestive
Abnormality of the gastrointestinal tractOpen Targets
0.02Suggestive
trauma complicationOpen Targets
0.02Suggestive
Abruptio PlacentaeOpen Targets
0.02Suggestive
systemic inflammatory response syndromeOpen Targets
0.02Suggestive
breast cancerOpen Targets
0.01Suggestive
cancerOpen Targets
0.01Suggestive
myelodysplastic syndromeOpen Targets
0.00Suggestive
cholangiocarcinomaOpen Targets
0.00Suggestive
meningiomaOpen Targets
0.00Suggestive
prostate adenocarcinomaOpen Targets
0.00Suggestive
telomere syndromeOpen Targets
0.00Suggestive
asthmaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SRSF1Protein interaction98%CLK3Protein interaction77%SRSF11Protein interaction77%TRA2AProtein interaction77%FUSProtein interaction76%CLK2Protein interaction75%
Tissue Expression6 tissues
Brain
100%
Ovary
36%
Bone Marrow
23%
Liver
9%
Lung
6%
Heart
5%
Gene Interaction Network
Click a node to explore
SRSF12SRSF1CLK3SRSF11TRA2AFUSCLK2
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q8WXF0
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.80LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.54 [0.37–0.80]
RankingsWhere SRSF12 stands among ~20K protein-coding genes
  • #12,047of 20,598
    Most Researched30
  • #6,675of 17,882
    Most Constrained (LOEUF)0.80
Genes detectedSRSF12
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Regulatory interplay between SR proteins governs
PMID: 39251328
RNA · 2024
1.00
2
SRSF12 deficiency enhances tumor innervation and accelerates pancreatic tumorigenesis.
PMID: 39986371
Cancer Lett · 2025
0.90
3
SRSF12 is a primate-specific splicing factor that induces a tissue-specific gene expression program.
PMID: 41060796
Mol Biol Cell · 2025
0.80
4
SRSF3: Newly discovered functions and roles in human health and diseases.
PMID: 32800280
Eur J Cell Biol · 2020
0.70
5
Pro-inflammatory polarization and colorectal cancer modulate alternative and intronic polyadenylation in primary human macrophages.
PMID: 37359548
Front Immunol · 2023
0.60