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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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TBCD
tubulin folding cofactor D
Chromosome 17 · 17q25.3
NCBI Gene: 6904Ensembl: ENSG00000141556.22HGNC: HGNC:11581UniProt: A0A804HI02
104PubMed Papers
21Diseases
0Drugs
93Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
GTPase activator activityprotein bindingbeta-tubulin bindingmitotic cell cycleearly-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndromePEHO syndromeneurodegenerative diseasegenetic disorder
✦AI Summary

TBCD (tubulin folding cofactor D) is a chaperone protein essential for tubulin heterodimer assembly and microtubule dynamics regulation. TBCD functions as a cofactor in the post-chaperonin tubulin folding pathway, capturing GTP-bound β-tubulin and facilitating proper α/β-tubulin complex assembly 1. As a GTPase-activating protein for ARL2, TBCD's interaction with β-tubulin is regulated via ARL2 binding, which also antagonizes TBCD-induced epithelial cell detachment and tight junction disassembly 1. TBCD localizes to centrosomes and midbodies during the cell cycle, where it participates in centriologenesis, spindle microtubule organization, and cytokinesis 2. Proper TBCD function is critical for mitotic spindle assembly and neuron morphogenesis 2. TBCD expression is detected in human gametes, with differential localization in sperm (middle region and tail) versus oocytes (cytosolic), suggesting roles in gametogenesis-associated cytoskeletal changes 3. Mutations in TBCD cause progressive encephalopathy with brain atrophy and thin corpus callosum (PEBAT), a severe neurodegenerative tubulinopathy presenting with developmental regression, epilepsy, and microcephaly within the first year of life 45. Disease severity reflects TBCD's critical role in neuronal microtubule dynamics during development.

Sources cited
1
TBCD functions in tubulin heterodimer assembly and acts as a GTPase-activating protein; its interaction with β-tubulin is regulated by ARL2
PMID: 20740604
2
TBCD localizes to centrosomes and midbodies; participates in centriologenesis, spindle organization, and cytokinesis with cell-cycle-specific patterns
PMID: 20107510
3
TBCD is expressed in human gametes with differential localization in sperm (middle region and tail) versus oocytes (cytosolic)
PMID: 28583220
4
TBCD mutations cause progressive encephalopathy with brain atrophy and thin corpus callosum (PEBAT), a severe neurodegenerative disease
PMID: 36527993
5
TBCD mutations present with early-onset developmental regression, epilepsy, microcephaly, and brain atrophy; disease onset occurs within the first year of life
PMID: 31569255
Disease Associationsⓘ21
early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndromeOpen Targets
0.84Strong
PEHO syndromeOpen Targets
0.56Moderate
neurodegenerative diseaseOpen Targets
0.53Moderate
genetic disorderOpen Targets
0.42Moderate
seborrhea-like dermatitis with psoriasiform elementsOpen Targets
0.39Weak
mixed connective tissue diseaseOpen Targets
0.31Weak
alcohol drinkingOpen Targets
0.28Weak
preeclampsiaOpen Targets
0.27Weak
peripheral vascular diseaseOpen Targets
0.27Weak
seborrheic keratosisOpen Targets
0.23Weak
protozoa infectious diseaseOpen Targets
0.19Weak
Intellectual disabilityOpen Targets
0.15Weak
Thiel-Behnke corneal dystrophyOpen Targets
0.15Weak
hair colorOpen Targets
0.14Weak
myeloid leukemiaOpen Targets
0.12Weak
hyperpituitarismOpen Targets
0.12Weak
type 2 diabetes mellitusOpen Targets
0.11Weak
diabetes mellitusOpen Targets
0.10Suggestive
skin diseaseOpen Targets
0.10Suggestive
SplenomegalyOpen Targets
0.08Suggestive
Encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosumUniProt
Pathogenic Variants93
NM_005993.4(TBCD):c.1150_1171delPathogenic
not provided|Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome|TBCD-related disorder
★★☆☆2026
NM_005993.5(TBCD):c.1661C>T (p.Ala554Val)Pathogenic
not provided|Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome
★★☆☆2025→ Residue 554
NM_005993.5(TBCD):c.1423G>A (p.Ala475Thr)Pathogenic
not provided|Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome
★★☆☆2025→ Residue 475
NM_005993.5(TBCD):c.1306C>T (p.Arg436Ter)Pathogenic
not provided|Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome
★★☆☆2025→ Residue 436
NM_005993.5(TBCD):c.967C>T (p.Arg323Ter)Pathogenic
Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome|not provided
★★☆☆2025→ Residue 323
NM_005993.5(TBCD):c.337C>T (p.Arg113Ter)Pathogenic
not provided
★★☆☆2025→ Residue 113
NM_005993.5(TBCD):c.2314C>T (p.Arg772Cys)Pathogenic
Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome|not provided
★★☆☆2025→ Residue 772
NM_005993.5(TBCD):c.230A>G (p.His77Arg)Pathogenic
not provided|Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome
★★☆☆2024→ Residue 77
NM_005993.5(TBCD):c.345_346del (p.Tyr115_Lys116delinsTer)Likely pathogenic
Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome|not provided
★★☆☆2024→ Residue 115
NM_005993.5(TBCD):c.2007-2A>GLikely pathogenic
not provided|Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome
★★☆☆2024
NM_005993.5(TBCD):c.3099C>G (p.Asn1033Lys)Pathogenic
not provided
★★☆☆2024→ Residue 1033
NM_005993.5(TBCD):c.988C>T (p.Gln330Ter)Pathogenic
not provided|Inborn genetic diseases
★★☆☆2024→ Residue 330
NM_005993.5(TBCD):c.2280C>A (p.Tyr760Ter)Pathogenic
Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome|not provided
★★☆☆2023→ Residue 760
NM_005993.5(TBCD):c.2983del (p.Glu995fs)Likely pathogenic
TBCD-related disorder|Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome
★★☆☆2023→ Residue 995
NM_005993.5(TBCD):c.907C>T (p.Arg303Ter)Pathogenic
not provided|Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome
★★☆☆2023→ Residue 303
NM_005993.5(TBCD):c.1224-2A>GPathogenic
Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome|not provided
★★☆☆2022
NM_005993.5(TBCD):c.1534-1G>ALikely pathogenic
not provided
★☆☆☆2026
NM_005993.5(TBCD):c.1148+1G>ALikely pathogenic
not provided
★☆☆☆2025
NM_005993.5(TBCD):c.2115del (p.Trp705fs)Pathogenic
not provided
★☆☆☆2025→ Residue 705
NM_005993.5(TBCD):c.1272_1318+43delLikely pathogenic
not provided
★☆☆☆2025
View on ClinVar ↗
Related Genes
TUBA1AProtein interaction82%CPN1Protein interaction76%TUBB4BProtein interaction76%ARL13AProtein interaction74%TUBB2AProtein interaction73%TUBBProtein interaction72%
Tissue Expression6 tissues
Ovary
100%
Liver
73%
Lung
71%
Bone Marrow
68%
Heart
66%
Brain
56%
Gene Interaction Network
Click a node to explore
TBCDTUBA1ACPN1TUBB4BARL13ATUBB2ATUBB
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9BTW9
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.76LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.64 [0.55–0.76]
RankingsWhere TBCD stands among ~20K protein-coding genes
  • #4,622of 20,598
    Most Researched104 · top quartile
  • #825of 5,498
    Most Pathogenic Variants93 · top quartile
  • #6,130of 17,882
    Most Constrained (LOEUF)0.76
Genes detectedTBCD
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Expression and localization of tubulin cofactors TBCD and TBCE in human gametes.
PMID: 28583220
Zygote · 2017
1.00
2
Genetic Heterogeneity Underlying Phenotypes with Early-Onset Cerebellar Atrophy.
PMID: 38003592
Int J Mol Sci · 2023
0.90
3
PEBAT, an Intriguing Neurodegenerative Tubulinopathy Caused by a Novel Homozygous Variant in TBCD: A Case Series and Literature Review.
PMID: 36527993
Pediatr Neurol · 2023
0.80
4
TBCD links centriologenesis, spindle microtubule dynamics, and midbody abscission in human cells.
PMID: 20107510
PLoS One · 2010
0.70
5
Developmental Regression and Epilepsy of Infancy with Migrating Focal Seizures Caused by TBCD Mutation: A Case Report and Review of the Literature.
PMID: 31569255
Neuropediatrics · 2020
0.60