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10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
THOC2
THO complex subunit 2
Chromosome X Β· Xq25
NCBI Gene: 57187Ensembl: ENSG00000125676.21HGNC: HGNC:19073UniProt: Q8NI27
131PubMed Papers
22Diseases
0Drugs
21Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedTransporter
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
chromosome, telomeric regiongeneration of neuronsnucleuscytoplasmX-linked non-syndromic intellectual disabilityneurodegenerative diseaseX-linked complex neurodevelopmental disordergenetic disorder
✦AI Summary

THOC2 encodes the largest subunit of the evolutionarily conserved TREX (Transcription-Export) complex, which plays a critical role in coupling transcription to mRNA processing and nuclear export 12. The protein functions in multiple RNA processing steps including 3'-end processing, 5' capping, transcriptional regulation, R-loop resolution, and splicing, facilitating the export of mRNA from nucleus to cytoplasm 2. THOC2 also regulates stem cell properties by facilitating nuclear export of key transcription factors like SOX2 and NANOG 3. Loss-of-function variants in THOC2 cause severe neurodevelopmental disorders characterized by intellectual disability, seizures, movement disorders, and cerebellar hypoplasia 45. The molecular mechanism involves R-loop accumulation, DNA damage, and consequent cell death when THOC2 function is compromised 1. THOC2 mutations are associated with X-linked intellectual developmental disorder and arthrogryposis multiplex congenita, with affected individuals showing growth delays, hypotonia, and microcephaly 67. The protein's essential role in mRNA export makes it critical for normal brain development and function, establishing THOC2 as an important target for understanding neurodevelopmental diseases 2.

Sources cited
1
THOC2 encodes the largest subunit of TREX complex and its dysfunction leads to R-loop accumulation and DNA damage
PMID: 38331934
2
TREX complex mediates mRNA export and multiple RNA processing functions essential for brain development
PMID: 40651286
3
THOC2 facilitates nuclear export of SOX2 and NANOG transcripts and regulates stem cell properties
PMID: 34708581
4
THOC2 variants cause neurodevelopmental disorders with intellectual disability and seizure disorders
PMID: 29851191
5
THOC2 disruption is associated with cognitive impairment and cerebellar hypoplasia
PMID: 23749989
6
THOC2 mutations cause arthrogryposis multiplex congenita with muscular phenotype
PMID: 37945483
7
THOC2 variants identified in cerebral palsy patients through whole exome sequencing
PMID: 35076175
Disease Associationsβ“˜22
X-linked non-syndromic intellectual disabilityOpen Targets
0.75Strong
neurodegenerative diseaseOpen Targets
0.50Moderate
X-linked complex neurodevelopmental disorderOpen Targets
0.37Weak
genetic disorderOpen Targets
0.34Weak
rheumatoid arthritisOpen Targets
0.33Weak
Intellectual disabilityOpen Targets
0.17Weak
Neurodevelopmental disorderOpen Targets
0.12Weak
autismOpen Targets
0.12Weak
Neurodevelopmental abnormalityOpen Targets
0.11Weak
melanomaOpen Targets
0.08Suggestive
triple-negative breast cancerOpen Targets
0.07Suggestive
hepatocellular carcinomaOpen Targets
0.07Suggestive
gastric cancerOpen Targets
0.07Suggestive
Cortical dysplasia - focal epilepsy syndromeOpen Targets
0.03Suggestive
neoplasmOpen Targets
0.03Suggestive
Reunion island Larsen syndromeOpen Targets
0.02Suggestive
Reunion Island's Larsen syndromeOpen Targets
0.02Suggestive
Neurodevelopmental delayOpen Targets
0.02Suggestive
glioblastoma multiformeOpen Targets
0.02Suggestive
Cerebellar hypoplasiaOpen Targets
0.01Suggestive
Arthrogryposis multiplex congenita 7, X-linkedUniProt
Intellectual developmental disorder, X-linked, syndromic, Kumar typeUniProt
Pathogenic Variants21
NM_001081550.2(THOC2):c.2087C>T (p.Thr696Ile)Pathogenic
X-linked intellectual disability-short stature-overweight syndrome|not provided
β˜…β˜…β˜†β˜†2020β†’ Residue 696
NM_001081550.2(THOC2):c.4450-2A>GPathogenic
not provided|X-linked intellectual disability-short stature-overweight syndrome
β˜…β˜†β˜†β˜†2024
NM_001081550.2(THOC2):c.3323C>T (p.Ser1108Leu)Likely pathogenic
X-linked intellectual disability-short stature-overweight syndrome|not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 1108
NM_001081550.2(THOC2):c.2482-1_2484delLikely pathogenic
not provided
β˜…β˜†β˜†β˜†2023
NM_001081550.2(THOC2):c.2642A>G (p.Tyr881Cys)Likely pathogenic
X-linked intellectual disability-short stature-overweight syndrome|not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 881
NM_001081550.2(THOC2):c.2788C>T (p.Arg930Cys)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2022β†’ Residue 930
NM_001081550.2(THOC2):c.2818G>A (p.Glu940Lys)Likely pathogenic
Inborn genetic diseases
β˜…β˜†β˜†β˜†2022β†’ Residue 940
NM_001081550.2(THOC2):c.1844G>A (p.Cys615Tyr)Likely pathogenic
X-linked intellectual disability-short stature-overweight syndrome
β˜…β˜†β˜†β˜†2022β†’ Residue 615
NM_001081550.2(THOC2):c.149A>C (p.Tyr50Ser)Likely pathogenic
X-linked intellectual disability-short stature-overweight syndrome
β˜…β˜†β˜†β˜†2019β†’ Residue 50
NM_001081550.2(THOC2):c.34T>C (p.Trp12Arg)Likely pathogenic
X-linked intellectual disability-short stature-overweight syndrome
β˜…β˜†β˜†β˜†β†’ Residue 12
NM_001081550.2(THOC2):c.2695T>C (p.Tyr899His)Likely pathogenic
X-linked intellectual disability-short stature-overweight syndrome
β˜…β˜†β˜†β˜†β†’ Residue 899
NM_001081550.2(THOC2):c.1942G>T (p.Ala648Ser)Likely pathogenic
X-linked intellectual disability-short stature-overweight syndrome
β˜…β˜†β˜†β˜†β†’ Residue 648
NM_001081550.2(THOC2):c.3559C>T (p.His1187Tyr)Pathogenic
X-linked intellectual disability-short stature-overweight syndrome
β˜†β˜†β˜†β˜†2024β†’ Residue 1187
NM_001081550.2(THOC2):c.3215C>T (p.Thr1072Ile)Likely pathogenic
THOC2-related disorder
β˜†β˜†β˜†β˜†2024β†’ Residue 1072
NM_001081550.2(THOC2):c.3305A>G (p.Tyr1102Cys)Likely pathogenic
X-linked intellectual disability-short stature-overweight syndrome
β˜†β˜†β˜†β˜†2020β†’ Residue 1102
NM_001081550.2(THOC2):c.3503+4A>CLikely pathogenic
X-linked intellectual disability-short stature-overweight syndrome
β˜†β˜†β˜†β˜†2018
NM_001081550.2(THOC2):c.2138G>A (p.Gly713Asp)Pathogenic
X-linked intellectual disability-short stature-overweight syndrome
β˜†β˜†β˜†β˜†2018β†’ Residue 713
NM_001081550.2(THOC2):c.3034T>C (p.Ser1012Pro)Pathogenic
X-linked intellectual disability-short stature-overweight syndrome
β˜†β˜†β˜†β˜†2015β†’ Residue 1012
NM_001081550.2(THOC2):c.2399T>C (p.Ile800Thr)Pathogenic
X-linked intellectual disability-short stature-overweight syndrome
β˜†β˜†β˜†β˜†2015β†’ Residue 800
NM_001081550.2(THOC2):c.937C>T (p.Leu313Phe)Pathogenic
X-linked intellectual disability-short stature-overweight syndrome
β˜†β˜†β˜†β˜†2015β†’ Residue 313
View on ClinVar β†—
Related Genes
CDC5LProtein interaction100%CYLDProtein interaction99%GLI2Protein interaction99%DHX16Protein interaction99%EIF4A3Protein interaction99%MAGOHProtein interaction95%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
84%
Lung
80%
Liver
58%
Brain
55%
Heart
54%
Gene Interaction Network
Click a node to explore
THOC2CDC5LCYLDGLI2DHX16EIF4A3MAGOH
PROTEIN STRUCTURE
Preparing viewer…
PDB7APK Β· 3.30 Γ… Β· EM
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.13Highly Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.08 [0.05–0.13]
RankingsWhere THOC2 stands among ~20K protein-coding genes
  • #3,575of 20,598
    Most Researched131 Β· top quartile
  • #2,136of 5,498
    Most Pathogenic Variants21
  • #147of 17,882
    Most Constrained (LOEUF)0.13 Β· top 1%
Genes detectedTHOC2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Compromised transcription-mRNA export factor THOC2 causes R-loop accumulation, DNA damage and adverse neurodevelopment.
PMID: 38331934
Nat Commun Β· 2024
1.00
2
Transcription-Export complex in neurodevelopmental disorders.
PMID: 40651286
Curr Opin Genet Dev Β· 2025
0.90
3
Mendelian etiologies identified with whole exome sequencing in cerebral palsy.
PMID: 35076175
Ann Clin Transl Neurol Β· 2022
0.80
4
THOC2 and THOC5 Regulate Stemness and Radioresistance in Triple-Negative Breast Cancer.
PMID: 34708581
Adv Sci (Weinh) Β· 2021
0.70
5
A de novo X;8 translocation creates a PTK2-THOC2 gene fusion with THOC2 expression knockdown in a patient with psychomotor retardation and congenital cerebellar hypoplasia.
PMID: 23749989
J Med Genet Β· 2013
0.60