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7 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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UBXN2B
UBX domain protein 2B
Chromosome 8 · 8q12.1
NCBI Gene: 137886Ensembl: ENSG00000215114.10HGNC: HGNC:27035UniProt: E5RJ36
31PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
positive regulation of mitotic centrosome separationprotein bindingnegative regulation of protein localization to centrosomeestablishment of mitotic spindle orientationmetabolic diseaseHypercholesterolemiacholelithiasisalcohol drinking
✦AI Summary

UBXN2B (UBX domain protein 2B) is an adapter protein that functions primarily in organellar biogenesis and cell division. It serves as a cofactor for the AAA+-ATPase VCP/p97, regulating its nucleocytoplasmic shuttling to coordinate cytosolic and nuclear functions 1. In the cytoplasm, UBXN2B-VCP complexes mediate Golgi and endoplasmic reticulum biogenesis, maintenance, and reassembly during mitosis 2. During mitotic progression, UBXN2B regulates spindle orientation by limiting cortical NuMA recruitment through PP1/Repo-Man phosphatase signaling, independent of Aurora A kinase 3. Nuclear UBXN2B-VCP complexes are critical for DNA damage repair; disease-associated VCP mutations show enhanced p37 binding and reduced nuclear VCP localization, increasing DNA damage susceptibility 1. UBXN2B associates with FAM104 proteins and other VCP cofactors to promote nuclear p97 import 4. Disease relevance includes multiple sclerosis, where UBXN2B shows sex-differential dysregulation in brain tissue 5, metabolic liver disease where the UBXN2B/CYP7A1 locus interacts with BMI 6, uveal melanoma where UBXN2B contributes to metastatic risk 7, and narcolepsy where UBXN2B variants associate with symptom onset age 8.

Sources cited
1
UBXN2B is an adapter protein required for Golgi and ER biogenesis and maintenance, forms VCP complexes with membrane fusion activity
PMID: 17141156
2
UBXN2B (p37) regulates VCP nucleocytoplasmic shuttling and is critical for both cytosolic autophagy and nuclear DNA damage repair functions
PMID: 38701207
3
UBXN2B regulates spindle orientation by limiting cortical NuMA recruitment via PP1/Repo-Man phosphatase signaling
PMID: 29222185
4
UBXN2B associates with FAM104 proteins and other VCP cofactors to regulate nuclear p97 localization
PMID: 37713320
5
UBXN2B shows sex-differential dysregulation in brain tissue of multiple sclerosis patients
PMID: 37023829
6
The UBXN2B/CYP7A1 locus shows genome-wide interaction with BMI for metabolic dysfunction-associated steatotic liver disease
PMID: 40452229
7
UBXN2B is identified as a key gene associated with uveal melanoma metastasis and prognosis
PMID: 38246894
8
UBXN2B variants (rs2859998) show strong association with age at onset of excessive daytime sleepiness in narcolepsy
PMID: 23496005
Disease Associationsⓘ20
metabolic diseaseOpen Targets
0.43Moderate
HypercholesterolemiaOpen Targets
0.40Moderate
cholelithiasisOpen Targets
0.38Weak
alcohol drinkingOpen Targets
0.33Weak
response to statinOpen Targets
0.31Weak
hyperlipidemiaOpen Targets
0.30Weak
Abnormality of the skeletal systemOpen Targets
0.28Weak
gallstonesOpen Targets
0.28Weak
placental retentionOpen Targets
0.28Weak
CholecystitisOpen Targets
0.22Weak
tympanic membrane perforationOpen Targets
0.21Weak
Intrahepatic cholestasis of pregnancyOpen Targets
0.20Weak
ovarian dysfunctionOpen Targets
0.16Weak
cholestasis, intrahepatic, of pregnancy 3Open Targets
0.10Weak
physical activityOpen Targets
0.10Weak
gallbladder diseaseOpen Targets
0.06Suggestive
liver diseaseOpen Targets
0.05Suggestive
familial hyperlipidemiaOpen Targets
0.04Suggestive
cancerOpen Targets
0.03Suggestive
hepatocellular carcinomaOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
FAF1Protein interaction100%ASPSCR1Protein interaction100%UBE4AProtein interaction89%UBE4BProtein interaction89%YOD1Protein interaction89%VCPProtein interaction88%
Tissue Expression6 tissues
Brain
100%
Heart
64%
Lung
51%
Liver
48%
Ovary
38%
Bone Marrow
30%
Gene Interaction Network
Click a node to explore
UBXN2BFAF1ASPSCR1UBE4AUBE4BYOD1VCP
PROTEIN STRUCTURE
Preparing viewer…
PDB8B5R · 6.10 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.98LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.64 [0.43–0.98]
RankingsWhere UBXN2B stands among ~20K protein-coding genes
  • #11,824of 20,598
    Most Researched31
  • #9,435of 17,882
    Most Constrained (LOEUF)0.98
Genes detectedUBXN2B
Sources retrieved7 papers
Response time—
📄 Sources
7▼
1
A deep transcriptome meta-analysis reveals sex differences in multiple sclerosis.
PMID: 37023829
Neurobiol Dis · 2023
1.00
2
p37 regulates VCP/p97 shuttling and functions in the nucleus and cytosol.
PMID: 38701207
Sci Adv · 2024
0.86
3
The FAM104 proteins VCF1/2 promote the nuclear localization of p97/VCP.
PMID: 37713320
Elife · 2023
0.71
4
Genome-wide interaction study with body mass index identifies CYP7A1 and GIPR as genetic modulators of metabolic dysfunction-associated steatotic liver disease.
PMID: 40452229
Clin Mol Hepatol · 2025
0.57
5
p37/UBXN2B regulates spindle orientation by limiting cortical NuMA recruitment via PP1/Repo-Man.
PMID: 29222185
J Cell Biol · 2018
0.43