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7 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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UTP11
UTP11 small subunit processome component
Chromosome 1 · 1p34.3
NCBI Gene: 51118Ensembl: ENSG00000183520.13HGNC: HGNC:24329UniProt: Q9Y3A2
52PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA bindingprotein bindingGO:0005615nucleoluscoronary artery diseasecancerhepatocellular carcinomacolorectal cancer
✦AI Summary

UTP11 is a nucleolar phosphoprotein and core component of the small subunit (SSU) processome involved in ribosomal biogenesis. Its primary function is to facilitate 18S rRNA biosynthesis by binding to the pre-rRNA processing factor MPP10 1. As part of the SSU processome machinery, UTP11 coordinates RNA folding, modifications, and cleavage of nascent pre-rRNA in the nucleolus. Mechanistically, UTP11 plays dual roles in cancer cell homeostasis. Its depletion impedes 18S rRNA biosynthesis, triggering nucleolar stress that prevents MDM2-mediated p53 degradation through ribosomal proteins RPL5 and RPL11 1. Additionally, UTP11 deficiency represses SLC7A11 expression by promoting NRF2 mRNA decay, reducing glutathione levels and enhancing ferroptosis 1. Conversely, UTP11 overexpression promotes cancer cell growth partly by enhancing Oct4 mRNA stability 2. Clinically, UTP11 is significantly overexpressed in hepatocellular carcinoma and other human cancers, consistently associating with poor prognosis 1342. It functions as a prognostic biomarker in HCC risk prediction models 4. Recent evidence links UTP11 to cardiac structure and function through ribosome biogenesis pathways 5. Notably, UTP11 expression is downregulated in early-stage Alzheimer's disease hippocampus, suggesting potential neurodegeneration implications 6.

Sources cited
1
UTP11 binds MPP10 and facilitates 18S rRNA biosynthesis; its depletion triggers nucleolar stress, p53 stabilization, and ferroptosis through SLC7A11/NRF2/GSH pathway in cancer cells
PMID: 37087976
2
UTP11 is highly expressed in HCC samples and promotes HCC growth by enhancing Oct4 mRNA stability; UTP11 knockdown suppresses tumor growth and extends survival in mice
PMID: 38233795
3
UTP11 identified as one of six genes significantly associated with diagnosis and prognosis of hepatocellular carcinoma
PMID: 30556603
4
UTP11 is a component of a six-gene prognostic signature effective for predicting overall survival in HCC patients
PMID: 33004423
5
UTP11 is one of 15 ribosome biogenesis-related genes identified as associated with cardiac structure and function
PMID: 40045424
6
CGI-94 (UTP11) is a nucleolar phosphoprotein downregulated in hippocampus of early-stage Alzheimer's disease brain
PMID: 11860508
7
UTP11 identified through SMR analysis as a potential causal gene in endothelial cell dysfunction associated with atherosclerosis
PMID: 39800194
Disease Associationsⓘ20
coronary artery diseaseOpen Targets
0.09Suggestive
cancerOpen Targets
0.08Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
colorectal cancerOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.07Suggestive
central nervous system cancerOpen Targets
0.06Suggestive
rheumatoid arthritisOpen Targets
0.06Suggestive
androgenetic alopeciaOpen Targets
0.06Suggestive
hypothyroidismOpen Targets
0.05Suggestive
breast cancerOpen Targets
0.04Suggestive
myxedemaOpen Targets
0.04Suggestive
liver cancerOpen Targets
0.04Suggestive
insomniaOpen Targets
0.04Suggestive
alcohol drinkingOpen Targets
0.03Suggestive
duodenal ulcerOpen Targets
0.03Suggestive
smoking initiationOpen Targets
0.03Suggestive
shortness of breathOpen Targets
0.03Suggestive
Chest painOpen Targets
0.03Suggestive
device complicationOpen Targets
0.03Suggestive
migraine disorderOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MCCProtein interaction100%NOP14Protein interaction100%BMS1Protein interaction100%DDX52Protein interaction100%KRR1Protein interaction100%PDCD11Protein interaction100%
Tissue Expression6 tissues
Heart
100%
Brain
99%
Lung
69%
Liver
56%
Bone Marrow
56%
Ovary
52%
Gene Interaction Network
Click a node to explore
UTP11MCCNOP14BMS1DDX52KRR1PDCD11
PROTEIN STRUCTURE
Preparing viewer…
PDB7MQA · 2.70 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.07LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.78 [0.57–1.07]
RankingsWhere UTP11 stands among ~20K protein-coding genes
  • #8,628of 20,598
    Most Researched52
  • #10,821of 17,882
    Most Constrained (LOEUF)1.07
Genes detectedUTP11
Sources retrieved7 papers
Response time—
📄 Sources
7▼
1
UTP11 deficiency suppresses cancer development via nucleolar stress and ferroptosis.
PMID: 37087976
Redox Biol · 2023
1.00
2
Six genes as potential diagnosis and prognosis biomarkers for hepatocellular carcinoma through data mining.
PMID: 30556603
J Cell Physiol · 2019
0.86
3
VAMP8 as a biomarker and potential therapeutic target for endothelial cell dysfunction in atherosclerosis.
PMID: 39800194
Gene · 2025
0.71
4
Identification of potential crucial genes associated with the pathogenesis and prognosis of liver hepatocellular carcinoma.
PMID: 33004423
J Clin Pathol · 2021
0.57
5
Mendelian randomization provides a multi-omics perspective on the regulation of genes involved in ribosome biogenesis in relation to cardiac structure and function.
PMID: 40045424
Clin Epigenetics · 2025
0.43