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3 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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UTP15
UTP15 small subunit processome component
Chromosome 5 · 5q13.2
NCBI Gene: 84135Ensembl: ENSG00000164338.11HGNC: HGNC:25758UniProt: Q8TED0
85PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedHub GeneTranscription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA bindingprotein bindingnucleolusfibrillar centerneurodegenerative diseaseAlzheimer diseaseParkinson diseaselysosomal storage disease
✦AI Summary

UTP15 is a ribosome biogenesis factor that functions as a core scaffold component of the small subunit (SSU) processome, the earliest precursor complex for eukaryotic 40S ribosomal subunit assembly. UTP15 is required for optimal pre-ribosomal RNA transcription by RNA polymerase I and participates in nucleolar processing of pre-18S rRNA 1. As part of the t-UTP sub-complex within the SSU processome, UTP15 directly interacts with other WD-repeat proteins (CIRH1A and WDR43) and localizes to nucleolar fibrillar centers where it functions as a structural scaffold 2. UTP15 exhibits extremely low mobility in living cells, consistent with its tight association to macro-protein complexes involved in rRNA folding, modification, cleavage, and quality control 34. The protein's phosphorylation regulates its binding interactions during cell cycle progression 2. While UTP15's primary role centers on ribosome biogenesis, it was identified within a chr5 region (5q13) associated with mild branchio-oculo-facial syndrome-like features in a duplication study, though direct pathogenic involvement remains unclear 5. UTP15's essential function in ribosomal RNA processing suggests potential relevance to diseases of impaired protein synthesis, though specific clinical associations require further investigation.

Sources cited
1
UTP15 is required for optimal pre-ribosomal RNA transcription by RNA polymerase I
PMID: 17699751
2
UTP15 is a component of the t-UTP sub-complex, localizes to fibrillar centers, directly binds CIRH1A and WDR43, has low mobility, and is regulated by phosphorylation
PMID: 24219289
3
UTP15 functions in the SSU processome during rRNA folding, modification, cleavage, and quality control
PMID: 34516797
4
UTP15 is immobilized in nucleolar fibrillar centers and acts as a structural scaffold for macro-protein complexes
PMID: 24754225
5
UTP15 is located within a chromosomal region (5q13) associated with branchio-oculo-facial syndrome-like features
PMID: 22140378
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.35Weak
Alzheimer diseaseOpen Targets
0.25Weak
lysosomal storage diseaseOpen Targets
0.25Weak
multiple sclerosisOpen Targets
0.25Weak
Parkinson diseaseOpen Targets
0.25Weak
hearing lossOpen Targets
0.06Suggestive
alcohol drinkingOpen Targets
0.05Suggestive
goutOpen Targets
0.04Suggestive
diaphragm diseaseOpen Targets
0.04Suggestive
male reproductive organ cancerOpen Targets
0.03Suggestive
KeloidOpen Targets
0.02Suggestive
VitiligoOpen Targets
0.02Suggestive
placental retentionOpen Targets
0.02Suggestive
neoplasmOpen Targets
0.01Suggestive
osteosarcomaOpen Targets
0.01Suggestive
coronary artery diseaseOpen Targets
0.00Suggestive
diffuse large B-cell lymphomaOpen Targets
0.00Suggestive
gastric cancerOpen Targets
0.00Suggestive
lung cancerOpen Targets
0.00Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MCCProtein interaction100%NOP14Protein interaction100%UTP14CProtein interaction100%BMS1Protein interaction100%KRR1Protein interaction100%AATFProtein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Liver
29%
Heart
27%
Lung
27%
Brain
23%
Ovary
22%
Gene Interaction Network
Click a node to explore
UTP15MCCNOP14UTP14CBMS1KRR1AATF
PROTEIN STRUCTURE
Preparing viewer…
PDB7RUO · 1.80 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.19Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.09 [0.05–0.19]
RankingsWhere UTP15 stands among ~20K protein-coding genes
  • #5,651of 20,598
    Most Researched85
  • #416of 17,882
    Most Constrained (LOEUF)0.19 · top 5%
Genes detectedUTP15
Sources retrieved3 papers
Response time—
📄 Sources
3
1
Interaction, mobility, and phosphorylation of human orthologues of WD repeat-containing components of the yeast SSU processome t-UTP sub-complex.
PMID: 24219289
Biochem Cell Biol · 2013
1.00
2
Dynamics of WD-repeat containing proteins in SSU processome components.
PMID: 24754225
Biochem Cell Biol · 2014
0.67
3
FOXD1 Duplication Causes Branchial Defects and Interacts with the TFAP2A Gene Implicated in the Branchio-Oculo-Facial Syndrome in Causing Eye Effects in Zebrafish.
PMID: 22140378
Mol Syndromol · 2010
0.33