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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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VAMP4
vesicle associated membrane protein 4
Chromosome 1 · 1q24.3
NCBI Gene: 8674Ensembl: ENSG00000117533.16HGNC: HGNC:12645UniProt: O75379
65PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
endocytic recyclingSNARE complex assemblycell surfaceGolgi apparatusParkinson diseaseMODYuterine fibroidchronic pancreatitis
✦AI Summary

VAMP4 (vesicle-associated membrane protein 4) is a v-SNARE protein that plays critical roles in intracellular vesicle trafficking and membrane fusion events. VAMP4 is predominantly localized to the trans-Golgi network (TGN) and functions in retrograde trafficking from early endosomes to the TGN 1. The protein is essential for maintaining the ribbon-like structure of the Golgi apparatus, as VAMP4 depletion leads to Golgi fragmentation while preserving normal stacking 1. VAMP4 contains an N-terminal extension with a dominant TGN-targeting signal consisting of a di-leucine motif and acidic clusters 2. In pancreatic β cells, VAMP4 regulates insulin homeostasis by targeting insulin secretory granules to lysosomes through SNARE complex formation with STX7, STX8, and VTI1B, controlling insulin levels in response to glucose 3. The protein also facilitates fatty acid uptake in muscle stem cells during injury-induced regeneration by forming STX11/SNAP23/VAMP4 SNARE complexes 4. In immune cells, VAMP4 is required for cytotoxic granule exocytosis in NK cells, working alongside VAMP7 to enable cytolytic activity 5. Genetic variants in VAMP4 may modulate Parkinson's disease risk in patients with LRRK2 mutations 6.

Sources cited
1
VAMP4 is essential for maintaining Golgi ribbon structure and functions in retrograde trafficking from early endosomes to TGN
PMID: 23677696
2
VAMP4 contains N-terminal TGN-targeting signal with di-leucine motif and acidic clusters
PMID: 12682051
3
VAMP4 regulates insulin homeostasis by targeting secretory granules to lysosomes through SNARE complex formation
PMID: 36053215
4
VAMP4 facilitates fatty acid uptake in muscle stem cells during injury-induced regeneration
PMID: 38198890
5
VAMP4 is required for cytotoxic granule exocytosis in NK cells
PMID: 21805468
6
VAMP4 genetic variants may modulate Parkinson's disease risk in LRRK2 mutation carriers
PMID: 32873436
Disease Associationsⓘ20
Parkinson diseaseOpen Targets
0.23Weak
MODYOpen Targets
0.07Suggestive
uterine fibroidOpen Targets
0.06Suggestive
chronic pancreatitisOpen Targets
0.06Suggestive
response to xenobiotic stimulusOpen Targets
0.05Suggestive
hyperinsulinemic hypoglycemia, familial, 2Open Targets
0.05Suggestive
diabetes mellitusOpen Targets
0.05Suggestive
open-angle glaucomaOpen Targets
0.05Suggestive
exercise-induced hyperinsulinismOpen Targets
0.05Suggestive
diabetic ketoacidosisOpen Targets
0.05Suggestive
maturity-onset diabetes of the young type 4Open Targets
0.05Suggestive
Partial pancreatic agenesisOpen Targets
0.05Suggestive
GCGR-related hyperglucagonemiaOpen Targets
0.05Suggestive
diabetes mellitus, transient neonatal, 2Open Targets
0.05Suggestive
hyperinsulinemic hypoglycemia, familial, 1Open Targets
0.05Suggestive
Matthew-Wood syndromeOpen Targets
0.04Suggestive
infectionOpen Targets
0.04Suggestive
type 1 diabetes mellitusOpen Targets
0.04Suggestive
islet cell adenomatosisOpen Targets
0.04Suggestive
maturity-onset diabetes of the young type 3Open Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
STX17Protein interaction100%VAMP2Protein interaction100%STX12Protein interaction99%SNAP23Protein interaction99%VPS51Protein interaction97%NAPAProtein interaction95%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
77%
Lung
67%
Heart
60%
Ovary
54%
Liver
45%
Gene Interaction Network
Click a node to explore
VAMP4STX17VAMP2STX12SNAP23VPS51NAPA
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt O75379
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.58LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.86 [0.49–1.58]
RankingsWhere VAMP4 stands among ~20K protein-coding genes
  • #7,219of 20,598
    Most Researched65
  • #15,596of 17,882
    Most Constrained (LOEUF)1.58
Genes detectedVAMP4
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Phage-assisted evolution of botulinum neurotoxin proteases with reprogrammed specificity.
PMID: 33602850
Science · 2021
1.00
2
The landscape of genetic diseases in Saudi Arabia based on the first 1000 diagnostic panels and exomes.
PMID: 28600779
Hum Genet · 2017
0.90
3
Dynamic palmitoylation of STX11 controls injury-induced fatty acid uptake to promote muscle regeneration.
PMID: 38198890
Dev Cell · 2024
0.80
4
Analysis of DNM3 and VAMP4 as genetic modifiers of LRRK2 Parkinson's disease.
PMID: 32873436
Neurobiol Aging · 2021
0.70
5
VAMP4 regulates insulin levels by targeting secretory granules to lysosomes.
PMID: 36053215
J Cell Biol · 2022
0.60