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GeneE
7 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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YIPF2
Yip1 domain family member 2
Chromosome 19 · 19p13.2
NCBI Gene: 78992Ensembl: ENSG00000130733.11HGNC: HGNC:28476UniProt: K7ENM8
20PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingGolgi trans cisternaGolgi medial cisternatrans-Golgi networkceliac diseasehepatocellular carcinomanon-small cell lung carcinomafamilial hypercholesterolemia
✦AI Summary

YIPF2 (Yip1 domain family member 2) is a trans-Golgi-localized transmembrane protein that functions as a Rab-GDF (GDI-displacement factor) regulating vesicular trafficking and protein recycling 1. The protein contains a cytosolic N-terminal domain and five transmembrane domains with a luminal C-terminus 2, and localizes to medial-/trans-Golgi and trans-Golgi network compartments 3. Mechanistically, YIPF2 regulates endocytic recycling by recruiting and activating Rab5 and Rab22a GTPases, modulating cargo protein glycosylation and trafficking through the ER-Golgi pathway 1. It also mediates surface recycling of TNFRSF10B through RAB8 inhibition 4 and controls CD147-MCT1 complex assembly critical for monocarboxylate transport 5. Dysregulation of YIPF2 associates with multiple diseases. In hepatocellular carcinoma, YIPF2 overexpression promotes CD147-dependent malignant phenotypes including enhanced migration and invasion 1. In non-small cell lung cancer, YIPF2 upregulation enhances chemotherapy-induced apoptosis via TNFRSF10B recycling 4. YIPF2 also contributes to osteoarthritis-related synovitis pathogenesis 6 and diabetic encephalopathy through CD147 trafficking modulation 5. YIPF2 knockdown delays Golgi reassembly and reduces glycosylation capacity 3, indicating essential roles in secretory pathway homeostasis.

Sources cited
1
YIPF2 acts as a Rab-GDF regulating Rab5/Rab22a activation and CD147 ER-Golgi trafficking; YIPF2 promotes HCC malignant phenotypes
PMID: 31189879
2
YIPF2 localizes to trans-Golgi with transmembrane topology and regulates endomembrane dynamics
PMID: 27999994
3
YIPF2 localizes to medial-/trans-Golgi and TGN; essential for Golgi reassembly and glycan synthesis
PMID: 28286305
4
YIPF2 promotes chemotherapy-induced apoptosis by enhancing TNFRSF10B recycling through RAB8 inhibition in NSCLC
PMID: 32303681
5
YIPF2 identified as DEG associated with VTE and severe COVID-19 immune pathogenesis
PMID: 38742101
6
YIPF2 is hub gene biomarker for OA-related synovitis linked to adaptive immune and inflammatory signaling
PMID: 41760060
7
YIPF2 inhibition improves CD147 translocation and MCT1 binding, ameliorating hIAPP-induced acidosis in diabetic encephalopathy
PMID: 39078594
Disease Associationsⓘ20
celiac diseaseOpen Targets
0.15Weak
hepatocellular carcinomaOpen Targets
0.08Suggestive
non-small cell lung carcinomaOpen Targets
0.04Suggestive
familial hypercholesterolemiaOpen Targets
0.03Suggestive
cardiovascular diseaseOpen Targets
0.03Suggestive
Abnormality of the gastrointestinal tractOpen Targets
0.02Suggestive
myxosarcomaOpen Targets
0.02Suggestive
lung cancerOpen Targets
0.01Suggestive
peripheral arterial diseaseOpen Targets
0.01Suggestive
peripheral neuropathyOpen Targets
0.01Suggestive
ulcerative colitisOpen Targets
0.01Suggestive
psoriasisOpen Targets
0.01Suggestive
liver cancerOpen Targets
0.00Suggestive
lung adenocarcinomaOpen Targets
0.00Suggestive
microphthalmia with limb anomaliesOpen Targets
0.00Suggestive
colorectal adenocarcinomaOpen Targets
0.00Suggestive
Hereditary breast cancerOpen Targets
0.00Suggestive
hereditary breast carcinomaOpen Targets
0.00Suggestive
ovarian serous cystadenocarcinomaOpen Targets
0.00Suggestive
Uveal MelanomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MEGF6Shared pathway100%CD163Shared pathway100%RAB36Shared pathway100%CACFD1Shared pathway100%LRP10Shared pathway100%LDLRAD1Shared pathway100%
Tissue Expression6 tissues
Liver
100%
Ovary
81%
Bone Marrow
73%
Lung
71%
Heart
52%
Brain
52%
Gene Interaction Network
Click a node to explore
YIPF2MEGF6CD163RAB36CACFD1LRP10LDLRAD1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9BWQ6
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.04LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.76 [0.57–1.04]
RankingsWhere YIPF2 stands among ~20K protein-coding genes
  • #14,319of 20,598
    Most Researched20
  • #10,301of 17,882
    Most Constrained (LOEUF)1.04
Genes detectedYIPF2
Sources retrieved7 papers
Response time—
📄 Sources
7▼
1
YIPF2 is a novel Rab-GDF that enhances HCC malignant phenotypes by facilitating CD147 endocytic recycle.
PMID: 31189879
Cell Death Dis · 2019
1.00
2
Functional characterisation of the YIPF protein family in mammalian cells.
PMID: 27999994
Histochem Cell Biol · 2017
0.86
3
Venous thromboembolism and severe COVID-19: a Mendelian randomization trial and transcriptomic analysis.
PMID: 38742101
Front Immunol · 2024
0.71
4
YIPF2 promotes chemotherapeutic agent-mediated apoptosis via enhancing TNFRSF10B recycling to plasma membrane in non-small cell lung cancer cells.
PMID: 32303681
Cell Death Dis · 2020
0.57
5
Integrative transcriptomic analysis identifies synovium-derived biomarkers for OA-related synovitis and builds a validated diagnostic nomogram.
PMID: 41760060
Medicine (Baltimore) · 2026
0.43