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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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POP5
POP5 ribonuclease P/MRP subunit
Chromosome 12 · 12q24.31
NCBI Gene: 51367Ensembl: ENSG00000167272.12HGNC: HGNC:17689UniProt: Q969H6
31PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleoplasmribonuclease MRP complexribonuclease P RNA bindingtRNA 5'-leader removalneurodegenerative diseasemathematical abilityAbnormality of the skeletal systemArthropathy
✦AI Summary

POP5 is a protein subunit of ribonuclease P (RNase P) and ribonuclease MRP (RNase MRP) complexes, two essential ribonucleoprotein enzymes involved in RNA processing 1. In RNase P, POP5 participates in the maturation of transfer RNA (tRNA) molecules by cleaving their 5' leader sequences 12. As a component of RNase MRP, it contributes to the processing of precursor ribosomal RNA (pre-rRNA) 13. Structurally, POP5 folds into an RNA recognition motif (RRM)-like domain and functions within a heteromeric complex where it interacts with RNase P/MRP RNA through its C-terminal helix, serving as a molecular recognition element 4. The protein is evolutionarily conserved across eukaryotes and archaea, with orthologs showing functional interchangeability 56. Beyond its classical role in RNA processing, recent genome-wide association studies validated POP5 as a regulator of telomere length in blood and immune cells; overexpression of POP5 lengthened telomeres in cell lines, indicating an unexpected role in telomere maintenance 7. POP5 localizes to the nucleus and accumulates in the nucleolus, consistent with its involvement in ribosomal and transfer RNA biogenesis 1.

Sources cited
1
POP5 is a protein subunit of human RNase MRP and RNase P; functions in tRNA 5' processing; nuclear/nucleolar localization
PMID: 11413139
2
POP5 is a component of ribonuclease P involved in tRNA 5' maturation
PMID: 30454648
3
POP5 is a component of ribonuclease MRP complex that cleaves pre-rRNA sequences
PMID: 28115465
4
POP5 C-terminal helix functions as molecular recognition element for RNase P RNA binding in heteromeric complexes
PMID: 26152732
5
POP5 homolog from archaeon Thermococcus kodakarensis exhibits functional conservation in pre-tRNA cleavage
PMID: 25704799
6
POP5 is evolutionarily conserved across eukaryotes and archaea as an RNase P protein subunit
PMID: 14550630
7
POP5 validated as a human telomere length regulation gene; overexpression lengthens telomeres in blood cells
PMID: 38789417
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.49Moderate
mathematical abilityOpen Targets
0.13Weak
Abnormality of the skeletal systemOpen Targets
0.06Suggestive
ArthropathyOpen Targets
0.05Suggestive
obesityOpen Targets
0.02Suggestive
neoplasmOpen Targets
0.02Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.01Suggestive
infectionOpen Targets
0.01Suggestive
Pallister-Hall syndromeOpen Targets
0.00Suggestive
systemic lupus erythematosusOpen Targets
0.00Suggestive
acute promyelocytic leukemiaOpen Targets
0.00Suggestive
Huntington diseaseOpen Targets
0.00Suggestive
cancerOpen Targets
0.00Suggestive
hepatocellular carcinomaOpen Targets
0.00Suggestive
sclerodermaOpen Targets
0.00Suggestive
severe malarial anemiaOpen Targets
0.00Suggestive
ulcerative colitisOpen Targets
0.00Suggestive
fungal infectious diseaseOpen Targets
0.00Suggestive
prostate cancerOpen Targets
0.00Suggestive
uterine corpus endometrial carcinomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
NHP2Protein interaction100%NOP10Protein interaction100%DKC1Protein interaction100%NOP58Protein interaction99%NOP56Protein interaction98%SNU13Protein interaction97%
Tissue Expression6 tissues
Liver
100%
Heart
80%
Bone Marrow
59%
Ovary
52%
Lung
51%
Brain
31%
Gene Interaction Network
Click a node to explore
POP5NHP2NOP10DKC1NOP58NOP56SNU13
PROTEIN STRUCTURE
Preparing viewer…
PDB6AHU · 3.66 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.20LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.82 [0.57–1.20]
RankingsWhere POP5 stands among ~20K protein-coding genes
  • #11,777of 20,598
    Most Researched31
  • #12,641of 17,882
    Most Constrained (LOEUF)1.20
Genes detectedPOP5
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Validation of human telomere length multi-ancestry meta-analysis association signals identifies POP5 and KBTBD6 as human telomere length regulation genes.
PMID: 38789417
Nat Commun · 2024
1.00
2
On archaeal homologs of the human RNase P proteins Pop5 and Rpp30 in the hyperthermophilic archaeon Thermococcus kodakarensis.
PMID: 25704799
Biosci Biotechnol Biochem · 2015
0.90
3
Functional implication of archaeal homologues of human RNase P protein pair Pop5 and Rpp30.
PMID: 26152732
J Biochem · 2016
0.80
4
The enigma of ribonuclease P evolution.
PMID: 14550630
Trends Genet · 2003
0.70
5
Archaeal homologs of human RNase P protein pairs Pop5 with Rpp30 and Rpp21 with Rpp29 work on distinct functional domains of the RNA subunit.
PMID: 20139629
Biosci Biotechnol Biochem · 2010
0.60