HomeAboutRankingsData Sources
Β© 2026 GeneE
🧬
GeneE
3 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
SLC7A6OS
solute carrier family 7 member 6 opposite strand
Chromosome 16 Β· 16q22.1
NCBI Gene: 84138Ensembl: ENSG00000103061.14HGNC: HGNC:25807UniProt: Q96CW6
19PubMed Papers
21Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
developmental processnucleuscytoplasmepilepsy, progressive myoclonic, 12Generalized myoclonic seizureobesityhypothyroidism
✦AI Summary

SLC7A6OS (solute carrier family 7 member 6 opposite strand) is a conserved vertebrate gene that directs RNA polymerase II nuclear import and plays a critical role in central nervous system (CNS) development. The gene encodes a protein with functional homology to yeast Iwr1, which specifically binds RNA polymerase II and regulates transcription of specific genes 1. During zebrafish development, slc7a6os is maternally expressed with prevalent localization in the developing CNS; knockdown results in morphological defects including poorly defined midbrain-hindbrain interfaces, altered somite morphology, and immobility, with disrupted expression of CNS-specific marker genes pax2a and neurod 1. These developmental phenotypes are rescued by synthetic mRNA co-injection, confirming slc7a6os function in regulating key developmental genes 1. Biallelic loss-of-function variants in SLC7A6OS cause progressive myoclonic epilepsy (PME12). A homozygous splice-site variant (c.191A>G) identified in two unrelated families with PME12 abolishes normal splicing, creates an abnormal isoform, and causes marked reduction in protein expression 2. This genetic evidence establishes SLC7A6OS as a novel disease gene for progressive myoclonus epilepsy, likely through disrupted CNS development or transcriptional regulation.

Sources cited
1
Homozygous splicing variant in SLC7A6OS causes progressive myoclonus epilepsy through biallelic loss-of-function
PMID: 33085104
2
SLC7A6OS plays critical role in CNS development, likely through RNA polymerase II-mediated transcriptional regulation of developmental genes
PMID: 25803583
⚠Limited data available β€” This gene has 2 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜21
epilepsy, progressive myoclonic, 12Open Targets
0.44Moderate
Generalized myoclonic seizureOpen Targets
0.27Weak
obesityOpen Targets
0.13Weak
hypothyroidismOpen Targets
0.13Weak
Abnormality of the skeletal systemOpen Targets
0.12Weak
hepatocellular carcinomaOpen Targets
0.05Suggestive
colorectal carcinomaOpen Targets
0.04Suggestive
chronic obstructive pulmonary diseaseOpen Targets
0.04Suggestive
schizophreniaOpen Targets
0.03Suggestive
diaphragm diseaseOpen Targets
0.03Suggestive
intelligenceOpen Targets
0.03Suggestive
nutritional deficiency diseaseOpen Targets
0.02Suggestive
osteosarcomaOpen Targets
0.01Suggestive
gliomaOpen Targets
0.01Suggestive
cancerOpen Targets
0.01Suggestive
nasopharyngeal carcinomaOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.01Suggestive
colorectal cancerOpen Targets
0.01Suggestive
irritable bowel syndromeOpen Targets
0.01Suggestive
myoclonic epilepsyOpen Targets
0.01Suggestive
Epilepsy, progressive myoclonic 12UniProt
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
TCF24Shared pathway100%BHLHA9Shared pathway100%ZNF674Shared pathway100%ZSCAN5BShared pathway100%ZNF621Shared pathway100%FERD3LShared pathway100%
Tissue Expression6 tissues
Brain
100%
Heart
53%
Bone Marrow
49%
Ovary
33%
Lung
33%
Liver
20%
Gene Interaction Network
Click a node to explore
SLC7A6OSTCF24BHLHA9ZNF674ZSCAN5BZNF621FERD3L
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q96CW6
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.96LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.67 [0.48–0.96]
RankingsWhere SLC7A6OS stands among ~20K protein-coding genes
  • #14,546of 20,598
    Most Researched19
  • #8,992of 17,882
    Most Constrained (LOEUF)0.96
Genes detectedSLC7A6OS
Sources retrieved3 papers
Response timeβ€”
πŸ“„ Sources
3
1
Progressive Myoclonus Epilepsy Caused by a Homozygous Splicing Variant of SLC7A6OS.
PMID: 33085104
Ann Neurol Β· 2021
1.00
2
slc7a6os gene plays a critical role in defined areas of the developing CNS in zebrafish.
PMID: 25803583
PLoS One Β· 2015
0.67
3
Microenvironmental regulation by fibrillin-1.
PMID: 22242013
PLoS Genet Β· 2012
0.33